The Institute for Computational Genomics, RWTH Aachen (www.costalab.org) is looking for an experienced bioinformatician to perform research on inference of disease progression and integrative analysis of multiome sequencing data (scRNA-seq, scATAC-seq and spatial transcriptomics). This project will be performed in …
Our manuscript describing a fast and universal integration approach for multiome protocols was accepted as a paper at ISMB 2022 and will soon appears in Bioinformatics Journal. A pre-print is found here.
The paper “The area under the ROC curve as a measure of clustering quality” was published in a special issue in “Data Mining and Knowledge Discovery” and accepted for a talk at ECML/PKDD 2022. Congrats to Pablo!
In a recently published work, we were able to show that there is increased scarring of the kidneys in patients who died after intensive care treatment for COVID19. Our data with kidney organoids from human induced pluripotent stem cells showed …
Kidney Fibrosis after COVID Infection / Study published in Cell Stem Cell Read more »
The 2nd annual meeting of the Fibromap consortia will take place at the 12.1.2022 from 9:00 and 13:00. The meeting will be virtual via zoom. Please use the following link for registration: here. Time Speaker Title 9:00 Ivan G. Costa …
In a joint work, M.Sc. Zhijian Li and Prof. Ivan G. Costa, Institute for Computational Genomics, and Dr. Christoph Kuppe and Prof. Rafael Kramann, Institute for Experimental Internal Medicine and Systems Biology of the Uniklinik RWTH Aachen developed a machine …
In a joint effort, the Institute for Computational Genomics at the Uniklinik RWTH Aachen and collaborators from Ulm University (Germany) and the Cochin Institute (Paris, France) have characterized the role of the transcription factor ONECUT1 in diabetes, which was recently …
Work on genetic variants in ONECUT1 associated to diabetes accepted in Nature Medicine Read more »
A tour the force led by @rschneiderlab on the characterization of rare stromal cells supporting myelofibrosis. From scRNA in mouse and human to markers for early disease detection and potential therapeutics just publised in Cell Stem Cell https://www.sciencedirect.com/science/article/pii/S1934590920305427
We are looking for an experienced bioinformatician for helping the creation a spatial map of fibrosis. The candidate will develop bioinformatic methods for tracking temporal changes of single cells and integrative analysis of scRNA-seq, scATAC-seq and spatial information. This position …
The Federal Ministry of Education and Research (BMBF) is funding the research project „Spatial Mapping of Single Cells in Fibrotic Disease“, FibroMap for short, of the Uniklinik RWTH Aachen with 3.3 million euros. The Aachen scientists Prof. Dr. med. Dr. …
Funding of the BMBF Consortia / Spatial Map of Fibrosis Read more »
